Bibliography

Overview of San Francisco Nutrient Science and Management

Comprehensive list of relevant citations for San Francisco Bay (updated periodically). Browse in html [1]or pdf [2] format.

Nutrient and Phytoplankton Dynamics

San Francisco Bay and Delta

Cloern J.E., Jassby, A.D., Thompson, J.K., Hieb, K.A. (2007) “A cold phase of the East Pacific triggers new phytoplankton blooms in San FranciscoBay”. PNAS November 20, 2007 vol. 104 no. 47 18561–18565
Cloern, J.E., Jassby, A.D. (2012) "Drivers of Change in Estuarine Coastal Ecosystems: Discoveries from Four Decades of Study in San Francisco Bay". In press
Dugdale, R.C., Wilkerson, F.P., Hogue, V.E., Marchi, A. (2007) “The role of ammonium and nitrate in spring bloom development in San Francisco Bay”.Estuarine, Coastal and Shelf Science 73: 17- 2
Glibert, P.M. (2010) "Long-Term Changes in Nutrient Loading and Stoichiometry and Their Relationships with Changes in the Food Web and Dominant Pelagic Fish Species in the San Francisco Estuary, California". Reviews in Fisheries Science. 18:2, 211-232
Jassby, A.D., Cloern, J.E. (2000) “Organic Matter Sources and Rehabilitation of the Sacramento – San Joaqin Delta”. Aquatic Conserv: Mar. Freshw.Ecosyst. 10: 323–352
Kimmerer, W.J. (2004) "Open Water Processes of the San Francisco Estuary: From Physical Forcing to Biological Responses". San Francisco Estuary and Watershed Science [online serial]. Vol 2, Issue 1 (Feb 2004) Article 1.
McKee, L.J., Gluchowski, D.C,. (2011) "Improved nutrient load estimates for wastewater, stormwater and atmospheric deposition to South San Francisco Bay (South of the Bay Bridge)". A Watershed Program report prepared for the Bay Area Clean Water Agencies (BACWA). San Francisco Estuary Institute, Oakland CA (pdf [3])
Parker, A.E., Dugdale R.C., Wilkerson R.F. (2012) "Elevated ammonium concentrations from wastewater discharge depress primary productivity in the Sacramento River and the Northern San Francisco Estuary". Mar. Pollut. Bull. Mar;64(3):574-86. Epub 2012 Jan 10.
Smith, S.V., Hollibaugh, J.T. (2006) "Water, salt, and nutrient exchanges in San Francisco Bay". Limnol. Oceanogr., 51(1, part 2), 2006, 504–517
Winder, M., Jassby A.D., Mac Nally, R. (2011) "Synergies Between Climate Anomalies and Hydrological Modifications Facilitate Estuarine Biotic Invasions". Ecology Letters 14: 749–757

California

U . S.

Global

Cloern, J.E., Jassby, A.D. (2008) "Complex seasonal patterns of primary producers at the land–sea interface" Ecology Letters v. 11, 1294–1303

Nutrient Management

San Francisco Bay and Delta

Delta Stewardship Council. "Improve Water Quality to Protect Human Health and the Environment". Draft Delta Plan Ch 6. 14 May 2012

McKee, L.J., Sutula, M., Gilbreath, A.N., Beagle, J., Gluchowski, D., and Hunt, J. (2011) "Nutrient Numeric Endpoint Development for San Francisco Bay - Literature Review and Data Gaps Analysis". Southern California Coastal Water Research Project Technical Report No. 644. June 2011 (pdf [4])

Meyer, J.S. Mulholland, P.J., Paerl, H.W., Ward, A.K. (2009) "A Framework for Research Addressing the Role of Ammonia/Ammonium in the Sacramento-San Joaquin Delta and the San Francisco Bay Estuary Ecosystem". CALFED Science Program 13 April 2009 (Available at CALFED website [5])

National Research Council. " A Review of the Use of Science and Adaptive Management in California's Draft Bay Delta Conservation Plan." Washington, DC: The National Academies Press, 2011. 1. Print.

California

Sutula M., P. Fong, J. Kaldy, K. McLaughlin, D. Gillett, M. Howard, C. Madden, L. Green, R. Kennison, J.A. Ranasinghe and N. Beck. (2011)"Review of Indicators for Development of Nutrient Numeric Endpoints in California Estuaries". Southern California Coastal Water Research Project Technical Report No. 646. June 2011. (Available at SCCWRP website [6])

U.S.

Global

Pelagic Organism Decline

Interagency Ecological Program.(2010) "Pelagic Organism Decline Work Plan and Synthesis of Results". Prepared by the Interagency Ecological Program for San Francisco Estuary . 6 Dec 2010.